Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896083_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 174870 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGTAGC | 10 | 0.0071020466 | 144.88962 | 8 |
CAATGGA | 17540 | 0.0 | 144.43529 | 1 |
AATGGAA | 17690 | 0.0 | 143.21057 | 2 |
TGGAATG | 2370 | 0.0 | 143.05557 | 4 |
ATGGAAT | 6575 | 0.0 | 142.79616 | 3 |
ATGGAAG | 5570 | 0.0 | 142.5485 | 3 |
TGGAAGT | 2015 | 0.0 | 142.37292 | 4 |
TGGAATA | 1960 | 0.0 | 141.56308 | 4 |
ATGGAAA | 5285 | 0.0 | 140.9144 | 3 |
TGGAAAT | 2090 | 0.0 | 139.69023 | 4 |
TGGAAAG | 1700 | 0.0 | 138.49744 | 4 |
TGGAAGG | 2130 | 0.0 | 138.08728 | 4 |
GGAATAG | 530 | 0.0 | 136.68832 | 5 |
TGGAAGA | 1475 | 0.0 | 136.54005 | 4 |
TGGAATT | 2290 | 0.0 | 135.39903 | 4 |
GGAATGA | 610 | 0.0 | 134.20105 | 5 |
GGAATTG | 705 | 0.0 | 133.58617 | 5 |
GGAAGTA | 630 | 0.0 | 133.39046 | 5 |
ATGGAAC | 420 | 0.0 | 132.81549 | 3 |
GGAAGTG | 710 | 0.0 | 132.64543 | 5 |