Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896078_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 469777 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCCTGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 3442 | 0.7326880626339731 | No Hit |
ATCCTGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 1006 | 0.21414415775995846 | No Hit |
ATCCTGTAGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT | 767 | 0.16326895527026652 | No Hit |
ATCCTGTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 695 | 0.1479425344365518 | No Hit |
ATCCTGTACTCTGCGTTGATACCACTGCTTCGCACGTACTCTGCGTTGAT | 632 | 0.13453191620705143 | No Hit |
ATCCTGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA | 608 | 0.12942310926247985 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCTGTA | 47070 | 0.0 | 144.61089 | 2 |
ATCCTGT | 47105 | 0.0 | 144.50345 | 1 |
CTGTAGG | 4925 | 0.0 | 144.46202 | 4 |
CCTGTAG | 14680 | 0.0 | 144.45917 | 3 |
CTGTATG | 5690 | 0.0 | 143.75737 | 4 |
CCTGTAT | 16800 | 0.0 | 143.73895 | 3 |
CTGTAAG | 4335 | 0.0 | 143.5663 | 4 |
CCTGTAA | 13320 | 0.0 | 143.54352 | 3 |
CTGTAGT | 5845 | 0.0 | 143.4159 | 4 |
CTGTATA | 4830 | 0.0 | 142.35329 | 4 |
CTGTAGA | 3865 | 0.0 | 141.90407 | 4 |
CTGTAAT | 5400 | 0.0 | 141.81744 | 4 |
CTGTATT | 6370 | 0.0 | 139.67136 | 4 |
CTGTAAA | 3680 | 0.0 | 138.8001 | 4 |
TGTATAG | 1670 | 0.0 | 137.96188 | 5 |
TGTAGTA | 1635 | 0.0 | 137.37016 | 5 |
CTGTACT | 1995 | 0.0 | 136.91368 | 4 |
CCTGTAC | 2650 | 0.0 | 135.60767 | 3 |
TGTAGTG | 2000 | 0.0 | 135.12238 | 5 |
TGTATGA | 1630 | 0.0 | 134.68011 | 5 |