Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896065_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1570921 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACGCTTA | 157165 | 0.0 | 144.84898 | 2 |
CGCTTAG | 52050 | 0.0 | 144.52835 | 3 |
AACGCTT | 157515 | 0.0 | 144.52713 | 1 |
CGCTTAA | 48900 | 0.0 | 144.4884 | 3 |
CGCTTAT | 53345 | 0.0 | 144.3748 | 3 |
GCTTAGG | 17960 | 0.0 | 143.94986 | 4 |
GCTTAAG | 17140 | 0.0 | 143.73445 | 4 |
GCTTATG | 19125 | 0.0 | 143.66786 | 4 |
GCTTAGA | 16600 | 0.0 | 142.91025 | 4 |
GCTTAAT | 17225 | 0.0 | 142.81483 | 4 |
GCTTAGT | 17595 | 0.0 | 142.77669 | 4 |
GCTTATA | 16835 | 0.0 | 142.42178 | 4 |
GCTTAAA | 14725 | 0.0 | 142.35931 | 4 |
CTTAGAG | 5115 | 0.0 | 141.37663 | 5 |
CTTAGGT | 5620 | 0.0 | 141.0502 | 5 |
CTTAAGT | 5740 | 0.0 | 140.62613 | 5 |
CTTATAG | 5925 | 0.0 | 140.51556 | 5 |
GCTTATT | 17985 | 0.0 | 139.7612 | 4 |
CTTATGG | 6440 | 0.0 | 139.51746 | 5 |
CTTAGTG | 5510 | 0.0 | 138.3429 | 5 |