FastQCFastQC Report
Sun 19 Mar 2023
SRR4896059_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4896059_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1087416
Sequences flagged as poor quality0
Sequence length151
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAGCTA1088600.0144.755332
ACAAGCT1089350.0144.655671
AAGCTAG401500.0144.463913
AGCTATG141400.0144.095184
AAGCTAT343750.0144.008683
AGCTAGG151650.0143.959474
AAGCTAA329150.0143.858433
AGCTAGA110700.0143.73694
AGCTAGT138200.0143.70924
GCTAGAT34000.0143.636415
AGCTAAG126000.0143.534934
GCTATAG42450.0143.208185
AGCTATA102350.0143.074434
AGCTAAT104900.0143.050114
GCTAATG41950.0143.01515
GCTAAGT37100.0142.962045
GCTAAAG38650.0142.103015
GCTAGTG50600.0142.051155
AGCTAAA99100.0141.917334
GCTAGGT48200.0141.908545
Produced by FastQC (version 0.11.5)