SRR4896059_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896059_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1087416
Sequences flagged as poor quality	0
Sequence length	151
%GC	42

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	17073	1.5700523074885782	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	9302	0.8554223958448284	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6552	0.602529298814805	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	5745	0.5283166699772672	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATTCTATAGAAGAAATGCAA	3031	0.2787341734901822	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAGAAATGCAAACTATCA	2300	0.21151059024329236	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	2293	0.21086686235994323	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	1692	0.15559822551810898	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	39475	0.0	113.475815	1
GGTATCA	40115	0.0	111.66807	8
GTGGTAT	40060	0.0	111.24229	6
GTATCAA	40350	0.0	111.017715	9
TGGTATC	40335	0.0	110.55574	7
AGCAGTG	40500	0.0	110.4326	2
CAGTGGT	40650	0.0	109.81109	4
AGTGGTA	40715	0.0	109.523895	5
GCAGTGG	41190	0.0	108.336266	3
TACGATC	40	0.006052151	54.372448	145
GCGCGAC	75	2.55144E-5	48.331066	145
AGGGGTA	365	0.0	43.69658	5
AAATATA	3455	0.0	43.64484	145
GCACGAA	75	0.0014827801	38.670185	1
GGGTATC	465	0.0	34.299465	7
CACGAAC	85	0.0027421035	34.117615	2
AGGTATC	440	0.0	31.305347	7
GAGGTAT	515	0.0	28.154018	6
GGGGTAT	590	0.0	27.03263	6
TGCGGCT	495	0.0	26.3624	145