FastQCFastQC Report
Sun 19 Mar 2023
SRR4896050_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4896050_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1828642
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGAGC1840150.0143.09572
AGGAGCT597550.0143.047653
GGAGCTA168050.0142.457144
CAAGGAG1848950.0142.414641
AGGAGCG627650.0142.255893
GGAGCGT238000.0141.337364
GAGCGTA65700.0141.040635
AGGAGCA458850.0140.98683
GGAGCAT168350.0140.877474
GAGCGAT69950.0140.705765
GAGCTAT62700.0140.66945
GAGCTAG57550.0140.621615
GGAGCGA181300.0140.187074
GAGCTAA46350.0139.805375
GAGCTTA58600.0138.9625
GAGCGTT89600.0138.615635
AGCGTAT24750.0138.472296
GGAGCTT229650.0138.387544
GAGCATA49450.0138.321095
GAGCAGT54200.0137.888855
Produced by FastQC (version 0.11.5)