Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896047_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1107240 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCATTCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 7231 | 0.6530652794335465 | No Hit |
ATCATTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 6127 | 0.5533578989198368 | No Hit |
ATCATTCCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG | 2515 | 0.22714136049998193 | No Hit |
ATCATTCCCATGTACTCTGCGTTGATACCACTGCCTCCCATGTACTCTGC | 2159 | 0.19498934287056102 | No Hit |
ATCATTCCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG | 2013 | 0.18180340305624798 | No Hit |
ATCATTCCTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 1447 | 0.13068530761171923 | No Hit |
ATCATTCCATGTACTCTGCGGTGATACCACTGCTCCCCATGTACTCTGCG | 1176 | 0.10621003576460387 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATCATTC | 111000 | 0.0 | 143.63675 | 1 |
TCATTCC | 111125 | 0.0 | 143.47519 | 2 |
CATTCCG | 32255 | 0.0 | 143.41963 | 3 |
CATTCCT | 36970 | 0.0 | 142.14986 | 3 |
ATTCCGA | 8605 | 0.0 | 141.9082 | 4 |
ATTCCGT | 13080 | 0.0 | 141.63303 | 4 |
ATTCCGG | 10180 | 0.0 | 141.45383 | 4 |
CATTCCA | 29755 | 0.0 | 141.38666 | 3 |
ATTCCTA | 11030 | 0.0 | 140.54034 | 4 |
ATTCCTG | 11565 | 0.0 | 139.39299 | 4 |
ATTCCAT | 14085 | 0.0 | 138.27477 | 4 |
TCCGATA | 920 | 0.0 | 137.73914 | 6 |
ATTCCAG | 7850 | 0.0 | 137.21274 | 4 |
TTCCGTA | 3655 | 0.0 | 136.71135 | 5 |
TCCGTAT | 1315 | 0.0 | 135.78706 | 6 |
CATTCCC | 13730 | 0.0 | 135.13765 | 3 |
TTCCGGA | 2515 | 0.0 | 133.9801 | 5 |
TTCCGAG | 2850 | 0.0 | 133.89474 | 5 |
TCCGTAG | 1185 | 0.0 | 133.6709 | 6 |
ATTCCCG | 3200 | 0.0 | 132.75 | 4 |