FastQCFastQC Report
Sun 19 Mar 2023
SRR4896046_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4896046_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2254111
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC2255250.0143.926572
ATAGCGA2255600.0143.904241
AGCGACT727700.0143.614123
GCGACTA210800.0143.487664
AGCGACG689950.0143.342563
GCGACGT247500.0143.069094
AGCGACA623600.0143.053243
GCGACGA195850.0142.897114
GCGACTT278600.0142.862884
GCGACAT227750.0142.830294
GCGACTG223450.0142.743354
CGACGAT72600.0142.214875
AGCGACC225250.0141.954273
CGACTAT76450.0141.833885
CGACGTA76650.0141.74565
CGACTTA75850.0141.721825
GCGACAG202050.0141.363024
CGACAGT72600.0141.123985
CGACTAG69650.0141.105515
CGACATG72200.0141.008325
Produced by FastQC (version 0.11.5)