Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896045_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2375169 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGCTAAC | 237820 | 0.0 | 143.81502 | 2 |
GCTAACG | 72195 | 0.0 | 143.7803 | 3 |
AGGCTAA | 237980 | 0.0 | 143.71834 | 1 |
GCTAACT | 80680 | 0.0 | 143.69629 | 3 |
GCTAACA | 62630 | 0.0 | 143.06853 | 3 |
CTAACGT | 26245 | 0.0 | 143.03952 | 4 |
CTAACTG | 27835 | 0.0 | 142.83571 | 4 |
CTAACGA | 20800 | 0.0 | 142.71893 | 4 |
CTAACGG | 24205 | 0.0 | 142.51242 | 4 |
GCTAACC | 22975 | 0.0 | 142.24475 | 3 |
CTAACTA | 22930 | 0.0 | 141.89592 | 4 |
TAACGTA | 7925 | 0.0 | 141.1833 | 5 |
CTAACTT | 29170 | 0.0 | 140.81561 | 4 |
TAACGTG | 8380 | 0.0 | 140.3052 | 5 |
TAACGAT | 7560 | 0.0 | 140.09494 | 5 |
CTAACAT | 23115 | 0.0 | 139.88809 | 4 |
TAACGAG | 6480 | 0.0 | 139.33305 | 5 |
CTAACCG | 7330 | 0.0 | 139.18661 | 4 |
TAACTAG | 8240 | 0.0 | 138.49486 | 5 |
TAACGTT | 9535 | 0.0 | 137.58125 | 5 |