Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896044_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6623772 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCATGC | 663420 | 0.0 | 143.77307 | 2 |
AGCCATG | 663540 | 0.0 | 143.74707 | 1 |
CCATGCG | 215325 | 0.0 | 143.57858 | 3 |
CATGCGA | 60670 | 0.0 | 143.06238 | 4 |
CATGCGT | 76510 | 0.0 | 142.89886 | 4 |
CCATGCA | 173585 | 0.0 | 142.75555 | 3 |
CCATGCT | 203755 | 0.0 | 142.68182 | 3 |
CATGCGG | 74020 | 0.0 | 142.25874 | 4 |
ATGCGAT | 22020 | 0.0 | 141.4168 | 5 |
CATGCTG | 66605 | 0.0 | 141.4163 | 4 |
CATGCAG | 58900 | 0.0 | 141.24947 | 4 |
CATGCAT | 63260 | 0.0 | 141.13173 | 4 |
ATGCGTA | 22400 | 0.0 | 140.68918 | 5 |
CATGCTT | 75660 | 0.0 | 140.35516 | 4 |
ATGCGAG | 19455 | 0.0 | 140.00298 | 5 |
CATGCAA | 50430 | 0.0 | 139.4883 | 4 |
ATGCTAG | 19495 | 0.0 | 139.01399 | 5 |
CCATGCC | 76470 | 0.0 | 138.79315 | 3 |
ATGCGAA | 18425 | 0.0 | 138.68538 | 5 |
ATGCGGT | 26585 | 0.0 | 138.42082 | 5 |