SRR4896044_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896044_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6623772
Sequences flagged as poor quality	0
Sequence length	150
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	56355	0.8507992122917274	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	30362	0.45837930411855965	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	19010	0.28699659348178047	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	16206	0.24466421851476772	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	11030	0.16652143219905516	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG	9859	0.14884268359478559	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC	9485	0.14319635398078315	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	9049	0.13661400181044878	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC	8012	0.12095826969889664	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGACTCTTAGCGGTGGATCA	7589	0.11457218032263188	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	187125	134.22073	6
GGTATCA	187700	133.8134	8
AAGCAGT	188445	133.43481	1
TGGTATC	188530	133.26248	7
GTATCAA	189435	132.59865	9
CAGTGGT	191360	131.38695	4
AGCAGTG	192200	130.80585	2
AGTGGTA	192390	130.54388	5
GCAGTGG	195950	128.28958	3
TCAACGC	186815	27.440495	10-14
CAACGCA	187190	27.397064	10-14
GTACATG	186655	27.351477	20-24
TACATGG	186800	27.334099	20-24
ATCAACG	187410	27.255022	10-14
AGAGTAC	187670	27.239132	15-19
CAGAGTA	188360	27.153109	15-19
AGTACAT	187735	27.138136	20-24
CGCAGAG	188750	27.050468	15-19
GAGTACA	186865	26.84682	20-24
GCAGAGT	190560	26.829052	15-19