Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896043_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1692084 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGCACCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 4808 | 0.2841466499299089 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCACCT | 169590 | 0.0 | 143.6731 | 1 |
GCACCTC | 169690 | 0.0 | 143.58842 | 2 |
CACCTCG | 51455 | 0.0 | 142.99254 | 3 |
ACCTCGA | 14795 | 0.0 | 142.68605 | 4 |
CACCTCT | 54835 | 0.0 | 142.05672 | 3 |
ACCTCGT | 18140 | 0.0 | 141.93605 | 4 |
ACCTCAT | 19065 | 0.0 | 141.77184 | 4 |
CACCTCA | 48440 | 0.0 | 141.50288 | 3 |
ACCTCGG | 17675 | 0.0 | 140.61894 | 4 |
ACCTCAG | 15170 | 0.0 | 140.39288 | 4 |
CCTCGTA | 5365 | 0.0 | 140.37651 | 5 |
ACCTCTA | 16205 | 0.0 | 140.22339 | 4 |
CCTCGAT | 5475 | 0.0 | 139.79178 | 5 |
ACCTCTG | 17805 | 0.0 | 139.22832 | 4 |
CTCGAAT | 1510 | 0.0 | 138.75496 | 6 |
CCTCTAG | 5680 | 0.0 | 137.66197 | 5 |
CCTCAGT | 5240 | 0.0 | 136.71756 | 5 |
CTCGATG | 1580 | 0.0 | 136.70886 | 6 |
CCTCGAA | 4510 | 0.0 | 136.65633 | 5 |
ACCTCTT | 21090 | 0.0 | 136.55762 | 4 |