FastQCFastQC Report
Sun 19 Mar 2023
SRR4896026_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4896026_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1448049
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTGGC1452800.0143.524222
ACATTGG1452850.0143.51931
ATTGGCG501300.0142.894073
ATTGGCT424750.0142.101473
ATTGGCA373600.0141.513923
TTGGCGA135500.0141.396324
TTGGCTA120250.0140.587114
TTGGCGT181950.0140.55734
TGGCGTA48550.0140.144185
TTGGCAT130150.0139.076464
TGGCGAT47200.0138.966115
TGGCTAG47400.0138.683555
ATTGGCC171750.0137.711793
TGGCGAA40900.0137.662585
TGGCTGA41350.0137.38335
TGGCTAT38150.0137.205765
TTGGCTG161200.0136.71964
TGGCATG53050.0136.535345
TGGCATA37000.0135.632435
TGGCGAG47450.0134.592215
Produced by FastQC (version 0.11.5)