Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896025_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2016410 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATCAGC | 201850 | 0.0 | 143.84976 | 1 |
ATCAGCA | 201900 | 0.0 | 143.81415 | 2 |
TCAGCAT | 65315 | 0.0 | 143.48148 | 3 |
TCAGCAG | 66830 | 0.0 | 143.26697 | 3 |
CAGCAGT | 24735 | 0.0 | 142.42772 | 4 |
CAGCATG | 22475 | 0.0 | 142.07744 | 4 |
CAGCATA | 18320 | 0.0 | 141.99522 | 4 |
TCAGCAC | 15770 | 0.0 | 141.8994 | 3 |
TCAGCAA | 55400 | 0.0 | 141.7382 | 3 |
CAGCATT | 23875 | 0.0 | 141.67749 | 4 |
CAGCAAT | 20370 | 0.0 | 141.41933 | 4 |
AGCAGTA | 7075 | 0.0 | 139.92891 | 5 |
CAGCAAG | 19410 | 0.0 | 139.73375 | 4 |
AGCATAG | 6615 | 0.0 | 139.537 | 5 |
AGCATTG | 8955 | 0.0 | 138.85387 | 5 |
CAGCAGA | 17715 | 0.0 | 138.79723 | 4 |
CAGCAGG | 24175 | 0.0 | 138.54933 | 4 |
AGCAGTG | 8380 | 0.0 | 138.24304 | 5 |
AGCATGA | 6540 | 0.0 | 138.16472 | 5 |
AGCAATG | 7220 | 0.0 | 137.91649 | 5 |