Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896021_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2331291 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGTAG | 233375 | 0.0 | 143.84575 | 1 |
TCGTAGA | 233395 | 0.0 | 143.83342 | 2 |
CGTAGAG | 71390 | 0.0 | 143.54616 | 3 |
CGTAGAA | 63220 | 0.0 | 143.53305 | 3 |
CGTAGAT | 83220 | 0.0 | 143.5155 | 3 |
CGTAGAC | 16130 | 0.0 | 142.88408 | 3 |
GTAGAGT | 24245 | 0.0 | 140.2879 | 4 |
GTAGAAG | 21070 | 0.0 | 139.89938 | 4 |
GTAGATG | 28335 | 0.0 | 139.70566 | 4 |
GTAGAGG | 26105 | 0.0 | 139.44914 | 4 |
GTAGATA | 26025 | 0.0 | 139.43515 | 4 |
GTAGACT | 5565 | 0.0 | 139.34232 | 4 |
GTAGAAT | 25385 | 0.0 | 139.17825 | 4 |
GTAGACG | 5360 | 0.0 | 139.16418 | 4 |
GTAGAGA | 21125 | 0.0 | 139.02391 | 4 |
TAGATAG | 8910 | 0.0 | 136.80807 | 5 |
GTAGATT | 30045 | 0.0 | 136.37943 | 4 |
TAGAGTA | 7060 | 0.0 | 135.63739 | 5 |
TAGATGG | 10125 | 0.0 | 134.61333 | 5 |
GTAGACA | 4280 | 0.0 | 133.40187 | 4 |