Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896014_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2469826 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGAGTA | 247185 | 0.0 | 143.88057 | 1 |
CGAGTAA | 247230 | 0.0 | 143.85439 | 2 |
GAGTAAG | 85705 | 0.0 | 142.84068 | 3 |
GAGTAAT | 84120 | 0.0 | 142.54494 | 3 |
GAGTAAC | 17960 | 0.0 | 141.755 | 3 |
GAGTAAA | 62545 | 0.0 | 140.47743 | 3 |
AGTAACG | 6510 | 0.0 | 139.35483 | 4 |
AGTAATG | 30405 | 0.0 | 138.88504 | 4 |
AGTAAGG | 31680 | 0.0 | 138.36363 | 4 |
AGTAAGT | 31655 | 0.0 | 137.8133 | 4 |
AGTAATA | 23975 | 0.0 | 137.63338 | 4 |
AGTAAGA | 23300 | 0.0 | 137.57254 | 4 |
GTAATAG | 8665 | 0.0 | 136.35545 | 5 |
AGTAAAG | 24760 | 0.0 | 135.97415 | 4 |
AGTAACT | 6025 | 0.0 | 134.32033 | 4 |
AGTAATT | 30930 | 0.0 | 134.22308 | 4 |
GTAATGA | 8390 | 0.0 | 134.1311 | 5 |
AGTAAAT | 23520 | 0.0 | 133.59184 | 4 |
GTAAGTG | 11040 | 0.0 | 133.56522 | 5 |
GTAAGAG | 8235 | 0.0 | 132.98361 | 5 |