SRR4896012_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896012_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1507517
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	12061	0.8000573127865224	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	5707	0.37856952856916376	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4621	0.30653053995411	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	4402	0.2920033405925107	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA	3929	0.2606272433412028	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA	3374	0.2238117381097527	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	3298	0.2187703355915721	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGACAAACCTACCGAGCC	2824	0.18732790409660388	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC	2807	0.1862002219543793	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC	2370	0.15721215747484107	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGAGGTAGTGACGAAAAA	1992	0.13213781337125882	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	41770	135.8121	1
GTGGTAT	41740	135.73529	6
GGTATCA	41805	135.55869	8
GTATCAA	41925	135.27373	9
TGGTATC	41970	135.02576	7
AGTGGTA	42520	133.29613	5
AGCAGTG	42570	133.13223	2
CAGTGGT	42640	133.04802	4
GCAGTGG	43115	131.51616	3
TCAACGC	41735	27.688557	10-14
AGAGTAC	41790	27.565971	15-19
CAACGCA	41965	27.543667	10-14
ATCAACG	41870	27.52362	10-14
GTACATG	41910	27.487041	20-24
CAGAGTA	41920	27.483921	15-19
TACATGG	42125	27.319407	20-24
AGTACAT	42165	27.252508	20-24
GCAGAGT	42540	27.113821	15-19
CGCAGAG	42600	27.035069	15-19
ACATGGG	42175	27.034359	20-24