Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896003_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1697679 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGACTGG | 169955 | 0.0 | 143.83801 | 1 |
GACTGGA | 170440 | 0.0 | 143.42871 | 2 |
ACTGGAT | 56090 | 0.0 | 142.7282 | 3 |
ACTGGAG | 56370 | 0.0 | 142.32578 | 3 |
CTGGATA | 16430 | 0.0 | 141.85173 | 4 |
CTGGATG | 19800 | 0.0 | 141.70811 | 4 |
ACTGGAC | 14440 | 0.0 | 141.30649 | 3 |
ACTGGAA | 45190 | 0.0 | 141.1152 | 3 |
CTGGAAT | 16260 | 0.0 | 140.98795 | 4 |
CTGGACG | 4940 | 0.0 | 139.18932 | 4 |
CTGGAAG | 15440 | 0.0 | 138.63634 | 4 |
CTGGATT | 19360 | 0.0 | 138.45772 | 4 |
CTGGAGT | 20030 | 0.0 | 138.13983 | 4 |
CTGGAGA | 15610 | 0.0 | 137.40326 | 4 |
CTGGACT | 4795 | 0.0 | 136.19092 | 4 |
CTGGAGG | 21265 | 0.0 | 133.33366 | 4 |
TGGATAG | 6205 | 0.0 | 131.9314 | 5 |
TGGAGTA | 6180 | 0.0 | 131.76607 | 5 |
CTGGACA | 3780 | 0.0 | 131.61813 | 4 |
TGGATGA | 5670 | 0.0 | 130.79274 | 5 |