SRR4896000_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896000_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2931816
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	20579	0.7019199022039582	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	17338	0.5913740835031939	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	15350	0.523566281103589	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9140	0.311752169986111	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA	5355	0.18265129871724556	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	4451	0.15181716724378339	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC	4223	0.14404041727038805	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTGCCCCTCATTTACATAAAT	3996	0.1362977758495076	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGACAAACCTACCGAGCC	3236	0.11037527593818984	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC	3013	0.10276906872736898	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	3003	0.10242798320222006	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	77870	137.35793	1
GTGGTAT	77880	137.28615	6
GGTATCA	78085	137.01793	8
TGGTATC	78230	136.73637	7
GTATCAA	78660	136.00719	9
CAGTGGT	79250	135.0128	4
AGCAGTG	79410	134.75917	2
AGTGGTA	80385	133.02588	5
GCAGTGG	80665	132.67148	3
TCAACGC	77945	27.999647	10-14
CAACGCA	78250	27.899712	10-14
ATCAACG	78025	27.8842	10-14
AGAGTAC	78030	27.880568	15-19
GTACATG	78235	27.781742	20-24
TACATGG	78275	27.771225	20-24
CAGAGTA	78415	27.769388	15-19
AGTACAT	78485	27.630867	20-24
CGCAGAG	78925	27.53886	15-19
GCAGAGT	79675	27.330235	15-19
GAGTACA	78190	27.291279	20-24