FastQCFastQC Report
Sun 19 Mar 2023
SRR4895997_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895997_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3682004
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATACCA3693850.0143.538041
TACCAAG1239250.0143.000693
ATACCAA3712150.0142.830442
TACCAAT1270000.0142.594013
ACCAAGT460300.0139.698464
ACCAATG424000.0139.601884
ACCAATA395350.0138.755024
CCAATAG145700.0137.822925
TACCAAC270600.0137.401323
TACCAAA980950.0137.335433
ACCAAGA364750.0135.393554
CCAAGAT134400.0134.892875
ACCAAGG442150.0134.131854
ACCAATT467500.0134.00474
CCAATGA127150.0133.524195
CCAATGT154100.0133.160285
CCAATAT133800.0132.807195
CCAATTG171100.0131.62835
CCAATGG151950.0131.064165
CCAAGTA149400.0130.65065
Produced by FastQC (version 0.11.5)