Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895996_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2208847 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACTTCGA | 221075 | 0.0 | 143.87299 | 2 |
CACTTCG | 221170 | 0.0 | 143.81117 | 1 |
CTTCGAT | 75685 | 0.0 | 143.66704 | 3 |
CTTCGAG | 71635 | 0.0 | 143.55775 | 3 |
CTTCGAA | 58035 | 0.0 | 143.25562 | 3 |
TTCGATG | 25555 | 0.0 | 142.76031 | 4 |
TCGATAG | 7980 | 0.0 | 142.73683 | 5 |
CTTCGAC | 16365 | 0.0 | 142.7241 | 3 |
TTCGAGT | 26265 | 0.0 | 142.68417 | 4 |
TTCGATA | 22850 | 0.0 | 142.48753 | 4 |
TTCGAGA | 19435 | 0.0 | 142.11063 | 4 |
TCGAGTA | 7615 | 0.0 | 142.109 | 5 |
TCGAATG | 7820 | 0.0 | 141.97443 | 5 |
TTCGAAT | 22385 | 0.0 | 141.90932 | 4 |
TCGAATA | 6360 | 0.0 | 141.73584 | 5 |
TTCGAAG | 19490 | 0.0 | 141.70961 | 4 |
TCGATAT | 8055 | 0.0 | 141.67598 | 5 |
TCGATGA | 6895 | 0.0 | 141.3894 | 5 |
TTCGATT | 26640 | 0.0 | 141.35135 | 4 |
TTCGAGG | 24775 | 0.0 | 141.32634 | 4 |