FastQCFastQC Report
Sun 19 Mar 2023
SRR4895996_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895996_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2208847
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTTCGA2210750.0143.872992
CACTTCG2211700.0143.811171
CTTCGAT756850.0143.667043
CTTCGAG716350.0143.557753
CTTCGAA580350.0143.255623
TTCGATG255550.0142.760314
TCGATAG79800.0142.736835
CTTCGAC163650.0142.72413
TTCGAGT262650.0142.684174
TTCGATA228500.0142.487534
TTCGAGA194350.0142.110634
TCGAGTA76150.0142.1095
TCGAATG78200.0141.974435
TTCGAAT223850.0141.909324
TCGAATA63600.0141.735845
TTCGAAG194900.0141.709614
TCGATAT80550.0141.675985
TCGATGA68950.0141.38945
TTCGATT266400.0141.351354
TTCGAGG247750.0141.326344
Produced by FastQC (version 0.11.5)