Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895992_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2178304 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACCACAT | 75235 | 0.0 | 142.42094 | 3 |
CAACCAC | 220280 | 0.0 | 142.39839 | 1 |
ACCACAG | 69025 | 0.0 | 141.5383 | 3 |
AACCACA | 221705 | 0.0 | 141.48314 | 2 |
CCACATG | 24885 | 0.0 | 140.81735 | 4 |
CCACATA | 22825 | 0.0 | 139.67842 | 4 |
CCACAGT | 26385 | 0.0 | 139.08812 | 4 |
CACATAG | 7715 | 0.0 | 137.37395 | 5 |
CCACAGA | 20765 | 0.0 | 137.16928 | 4 |
CCACATT | 27645 | 0.0 | 137.12425 | 4 |
CACATGT | 9245 | 0.0 | 136.52353 | 5 |
CCACAAT | 22955 | 0.0 | 136.34677 | 4 |
ACCACAA | 62465 | 0.0 | 135.34363 | 3 |
CACATGA | 7540 | 0.0 | 134.25995 | 5 |
CACAGTG | 8685 | 0.0 | 133.6373 | 5 |
CACATTG | 9890 | 0.0 | 133.5895 | 5 |
CACATGG | 8370 | 0.0 | 133.41936 | 5 |
CACAGAT | 7935 | 0.0 | 132.93005 | 5 |
CACAGGT | 7640 | 0.0 | 132.40837 | 5 |
CACAATG | 7940 | 0.0 | 132.39296 | 5 |