FastQCFastQC Report
Sun 19 Mar 2023
SRR4895992_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895992_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2178304
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCACAT752350.0142.420943
CAACCAC2202800.0142.398391
ACCACAG690250.0141.53833
AACCACA2217050.0141.483142
CCACATG248850.0140.817354
CCACATA228250.0139.678424
CCACAGT263850.0139.088124
CACATAG77150.0137.373955
CCACAGA207650.0137.169284
CCACATT276450.0137.124254
CACATGT92450.0136.523535
CCACAAT229550.0136.346774
ACCACAA624650.0135.343633
CACATGA75400.0134.259955
CACAGTG86850.0133.63735
CACATTG98900.0133.58955
CACATGG83700.0133.419365
CACAGAT79350.0132.930055
CACAGGT76400.0132.408375
CACAATG79400.0132.392965
Produced by FastQC (version 0.11.5)