Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895987_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2225628 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 9453 | 0.42473405259099906 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 9109 | 0.4092777409342442 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 8186 | 0.3678063000645211 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 5872 | 0.26383564548972244 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5539 | 0.24887357635687543 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 3804 | 0.170918050995045 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATTGGAGGGCAAGTCTGGTG | 3023 | 0.135826831797587 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCTCGGGTCGCTGCAGAC | 2948 | 0.13245699640730615 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGAGGTAGTGACGAAAAA | 2639 | 0.11857327459934904 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGACTCTTAGCGGTGGATCA | 2626 | 0.11798916979836702 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC | 2493 | 0.11201332837293564 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 2430 | 0.10918266664509972 | No Hit |
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC | 2423 | 0.10886814867534017 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA | 2381 | 0.1069810408567829 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 2252 | 0.10118492398549983 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 76345 | 0.0 | 137.07195 | 1 |
GTGGTAT | 76710 | 0.0 | 136.48944 | 6 |
GGTATCA | 76825 | 0.0 | 136.31326 | 8 |
TGGTATC | 77000 | 0.0 | 136.04086 | 7 |
GTATCAA | 77040 | 0.0 | 135.95457 | 9 |
AGCAGTG | 77525 | 0.0 | 135.10709 | 2 |
CAGTGGT | 77640 | 0.0 | 134.94102 | 4 |
AGTGGTA | 77700 | 0.0 | 134.75967 | 5 |
GCAGTGG | 78585 | 0.0 | 133.28468 | 3 |
TCAACGC | 76610 | 0.0 | 27.83601 | 10-14 |
AGAGTAC | 76755 | 0.0 | 27.730392 | 15-19 |
ATCAACG | 76680 | 0.0 | 27.70731 | 10-14 |
CAACGCA | 77075 | 0.0 | 27.68302 | 10-14 |
CAGAGTA | 76910 | 0.0 | 27.67825 | 15-19 |
GTACATG | 76785 | 0.0 | 27.670673 | 20-24 |
TACATGG | 76885 | 0.0 | 27.614084 | 20-24 |
AGTACAT | 77235 | 0.0 | 27.43115 | 20-24 |
CGCAGAG | 77520 | 0.0 | 27.375006 | 15-19 |
GCAGAGT | 77845 | 0.0 | 27.33841 | 15-19 |
GAGTACA | 76745 | 0.0 | 27.21039 | 20-24 |