Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895983_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1477450 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCAGGCGCGGTGGCTCA | 12400 | 0.8392839013164575 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 9806 | 0.6637111238959017 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGGCGCGGTGGCTCAC | 7177 | 0.4857693999796947 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 6972 | 0.4718941419337372 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 6819 | 0.46153846153846156 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 4085 | 0.27648989813530067 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCAGGCGTGGTGGCTCA | 3972 | 0.2688415851636265 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3847 | 0.26038106196487193 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCCTGCGCGGTGGCTCAG | 3443 | 0.233036650986497 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 3366 | 0.22782496869606417 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 2782 | 0.18829740431148262 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 2515 | 0.1702257267589428 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCGC | 2270 | 0.15364310128938372 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCAGGTGCAGTGGCTCA | 2167 | 0.14667163017360993 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGACTTTTTCCAAATGATCCTA | 1764 | 0.11939490338082506 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 1636 | 0.11073132762530036 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCGCA | 1503 | 0.10172933094182546 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 68775 | 0.0 | 138.46251 | 1 |
GTGGTAT | 69440 | 0.0 | 136.97813 | 6 |
GGTATCA | 69425 | 0.0 | 136.89365 | 8 |
TGGTATC | 69535 | 0.0 | 136.83241 | 7 |
GTATCAA | 69550 | 0.0 | 136.65224 | 9 |
AGCAGTG | 70015 | 0.0 | 136.0099 | 2 |
CAGTGGT | 70050 | 0.0 | 136.00008 | 4 |
AGTGGTA | 70550 | 0.0 | 134.85359 | 5 |
GCAGTGG | 71405 | 0.0 | 133.332 | 3 |
GTATCCA | 370 | 0.0 | 33.08165 | 9 |
CGATCGT | 20 | 0.006286402 | 28.79952 | 70-74 |
TCAACGC | 69470 | 0.0 | 27.95269 | 10-14 |
CAACGCA | 69655 | 0.0 | 27.90739 | 10-14 |
AGAGTAC | 69615 | 0.0 | 27.850271 | 15-19 |
TACATGG | 69585 | 0.0 | 27.83726 | 20-24 |
ATCAACG | 69465 | 0.0 | 27.836538 | 10-14 |
CAGAGTA | 69715 | 0.0 | 27.82272 | 15-19 |
GGTATCC | 440 | 0.0 | 27.817719 | 8 |
GTACATG | 69680 | 0.0 | 27.811705 | 20-24 |
AGTACAT | 69920 | 0.0 | 27.640041 | 20-24 |