Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895972_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1540501 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 14679 | 0.9528718254645728 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 9761 | 0.6336250349723889 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5552 | 0.3604022327801151 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4668 | 0.30301830378558664 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCAGAGAGAGGCACTTTGCA | 3490 | 0.2265496744240997 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 2688 | 0.17448868906933523 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC | 2465 | 0.16001287892705035 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 2297 | 0.1491073358602169 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC | 2192 | 0.142291371443446 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCTTTTACCTCGTTGCACTGC | 2007 | 0.13028229128056393 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCAGAGAGAGGCACTTTGC | 1885 | 0.12236278976774438 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTTACCTCGTTGCACTG | 1839 | 0.11937674821373048 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGACTCTTAGCGGTGGATCA | 1661 | 0.10782206567863312 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTCCGGCGGTGACGACC | 1627 | 0.10561499148653587 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG | 1605 | 0.1041868846563553 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGCGACCTCAGATCAGACGT | 1554 | 0.10087627336820944 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 46955 | 0.0 | 132.89052 | 1 |
GTGGTAT | 47165 | 0.0 | 132.3656 | 6 |
GGTATCA | 47185 | 0.0 | 132.32474 | 8 |
TGGTATC | 47605 | 0.0 | 131.20265 | 7 |
GTATCAA | 47655 | 0.0 | 131.00883 | 9 |
AGCAGTG | 47860 | 0.0 | 130.37009 | 2 |
CAGTGGT | 48115 | 0.0 | 129.79047 | 4 |
AGTGGTA | 48285 | 0.0 | 129.28036 | 5 |
GCAGTGG | 48735 | 0.0 | 128.0885 | 3 |
CGTGGTA | 145 | 3.6608668E-5 | 29.792639 | 5 |
CAACGCA | 47095 | 0.0 | 27.048426 | 10-14 |
CGACCTA | 900 | 0.0 | 27.03958 | 45-49 |
TCAACGC | 47100 | 0.0 | 27.011923 | 10-14 |
GTACATG | 47085 | 0.0 | 26.918728 | 20-24 |
TACATGG | 47190 | 0.0 | 26.880192 | 20-24 |
ATCAACG | 47230 | 0.0 | 26.843054 | 10-14 |
AGAGTAC | 47255 | 0.0 | 26.840345 | 15-19 |
CAGAGTA | 47360 | 0.0 | 26.786919 | 15-19 |
AGTACAT | 47360 | 0.0 | 26.671206 | 20-24 |
CGCAGAG | 47520 | 0.0 | 26.630062 | 15-19 |