Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895971_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1842186 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 10346 | 0.5616153851999743 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 8861 | 0.48100463253981957 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 7425 | 0.40305376330077414 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 5755 | 0.3124005936425529 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3777 | 0.20502815676592917 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA | 3395 | 0.1842919227483001 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 3002 | 0.16295857204429953 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGATCGCTTCTCGGCCTTTTG | 2660 | 0.14439367143165782 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGACAAACCTACCGAGCC | 2436 | 0.13223420436372874 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 2433 | 0.13207135435835468 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC | 2242 | 0.12170323734954018 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATTGGAGGGCAAGTCTGGTG | 1989 | 0.10796955356299526 | No Hit |
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC | 1978 | 0.10737243687662375 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGAGGTAGTGACGAAAAA | 1899 | 0.10308405340177376 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 55425 | 0.0 | 137.48355 | 1 |
GTGGTAT | 55755 | 0.0 | 136.68877 | 6 |
TGGTATC | 55920 | 0.0 | 136.37558 | 7 |
GGTATCA | 55955 | 0.0 | 136.32887 | 8 |
GTATCAA | 55985 | 0.0 | 136.21725 | 9 |
CAGTGGT | 56665 | 0.0 | 134.64977 | 4 |
AGCAGTG | 56745 | 0.0 | 134.3784 | 2 |
AGTGGTA | 57020 | 0.0 | 133.74469 | 5 |
GCAGTGG | 57420 | 0.0 | 132.88652 | 3 |
CGTGGTA | 135 | 2.2472545E-5 | 31.999504 | 5 |
TCAACGC | 55695 | 0.0 | 27.907566 | 10-14 |
CAACGCA | 55925 | 0.0 | 27.836563 | 10-14 |
ATCAACG | 55830 | 0.0 | 27.770447 | 10-14 |
GTACATG | 55845 | 0.0 | 27.734623 | 20-24 |
AGAGTAC | 56090 | 0.0 | 27.667393 | 15-19 |
CAGAGTA | 56155 | 0.0 | 27.640497 | 15-19 |
TACATGG | 56075 | 0.0 | 27.626 | 20-24 |
AGTACAT | 56155 | 0.0 | 27.525105 | 20-24 |
CGCAGAG | 56395 | 0.0 | 27.484568 | 15-19 |
CGACCTA | 700 | 0.0 | 27.359873 | 45-49 |