FastQCFastQC Report
Sun 19 Mar 2023
SRR4895967_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895967_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1301638
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCCATG1304250.0142.240341
GCCATGC1304500.0142.213072
CCATGCG453050.0141.932173
CCATGCA305200.0141.619283
CATGCGA107500.0141.336654
CATGCGT144800.0140.9554
CATGCGG162100.0140.903274
CCATGCT360850.0140.673513
CATGCAG103250.0139.492984
ATGCGTA38050.0139.345955
CATGCAT101200.0139.008934
ATGCGAT35650.0138.93175
CATGCTG132400.0138.762154
ATGCGAA28100.0138.725745
CCATGCC196500.0138.576813
ATGCGAG36000.0138.37285
CATGCTA91600.0138.25094
ATGCGGA38100.0138.040795
ATGCTAG32550.0137.932195
CATGCCG57850.0137.848754
Produced by FastQC (version 0.11.5)