Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895967_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1301638 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 9322 | 0.7161745431525509 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 4946 | 0.37998276018370697 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTAAGCGACTAAGCGTAC | 4472 | 0.34356710544713664 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 3881 | 0.29816277644014694 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 2985 | 0.22932643330941474 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 2304 | 0.17700773947902565 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA | 1964 | 0.15088680570173887 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATTCCAAAAAAAAAAAAAAA | 1643 | 0.12622557116494756 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGACAGCAAAAAAAAAAAAAAA | 1525 | 0.11716007061871272 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGCAAAAAAAAAAAAAAAAA | 1413 | 0.1085555277273712 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATGAAAAAAAAAAAAAAAAA | 1321 | 0.10148751035234066 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCAGAGAGAGGCACTTTGCA | 1309 | 0.10056559504255408 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 98220 | 0.0 | 141.92924 | 1 |
GGTATCA | 99885 | 0.0 | 139.83769 | 8 |
AGCAGTG | 99780 | 0.0 | 139.64531 | 2 |
GTATCAA | 100150 | 0.0 | 139.47485 | 9 |
GTGGTAT | 100085 | 0.0 | 139.39279 | 6 |
AGTGGTA | 100135 | 0.0 | 139.35194 | 5 |
TGGTATC | 100210 | 0.0 | 139.33388 | 7 |
CAGTGGT | 100325 | 0.0 | 139.1598 | 4 |
GCAGTGG | 100660 | 0.0 | 138.5676 | 3 |
CGGTATC | 120 | 3.8526196E-9 | 47.998924 | 7 |
AGCGGTA | 130 | 7.8198354E-9 | 44.306698 | 5 |
GCGGTAT | 140 | 1.5044861E-8 | 41.141937 | 6 |
ACGCAGT | 185 | 4.4638E-9 | 35.03701 | 1 |
CAACGCA | 99775 | 0.0 | 28.60885 | 10-14 |
ATCAACG | 99835 | 0.0 | 28.539732 | 10-14 |
TCAACGC | 99940 | 0.0 | 28.537123 | 10-14 |
AGAGTAC | 99205 | 0.0 | 28.494537 | 15-19 |
AACGCAG | 100070 | 0.0 | 28.494295 | 10-14 |
CGCAGAG | 99925 | 0.0 | 28.462147 | 15-19 |
CAGAGTA | 99380 | 0.0 | 28.454504 | 15-19 |