FastQCFastQC Report
Sun 19 Mar 2023
SRR4895961_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895961_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126210
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCAT254.091453E-8142.529726
CGTATGA254.091453E-8142.529728
GTCGAAT1000.0142.529726
CGAGTAT254.091453E-8142.529728
CGTAAAT254.091453E-8142.529728
TCGAGTA500.0142.529727
CGTCCAA1000.0142.529725
TCTATGG254.091453E-8142.529727
GTCATGA950.0142.529716
GTCATAG1200.0142.529716
GTCATAC202.3128978E-6142.529716
GTCGCTG400.0142.529716
TCTGAAC100.0074569727142.529717
GTCGAGA700.0142.529716
CGAGTAA151.314439E-4142.529718
CATGCTA100.0074569727142.529719
GTCCTAA100.0074569727142.529716
CTATAGA151.314439E-4142.529718
GTCTATG850.0142.529716
CTAAGTG100.0074569727142.529718