FastQCFastQC Report
Sun 19 Mar 2023
SRR4895956_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895956_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1900608
Sequences flagged as poor quality0
Sequence length150
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTA1910150.0141.845982
TGGTAGC360850.0141.709344
GTGGTAG633250.0141.309283
GTGGTAT624450.0141.017723
GGTATCC233800.0140.912415
GGTAGCC292300.0140.632255
TGGTATC320050.0140.554294
TGGTAAC214600.0140.432954
GTATCCG84800.0140.373266
GTGGTAC214050.0140.29433
GTAGCCG101350.0140.16756
TGGTGGT1934250.0140.078631
GTGGTAA452700.0139.992223
TGGTACC156900.0139.560354
GTAGCCT87550.0139.30216
GGTAACC170100.0138.913045
GTAACCG59150.0138.099996
GTATCCT73200.0137.495166
GTAGCCA63300.0137.153646
TAGCCTA21450.0136.577227
Produced by FastQC (version 0.11.5)