FastQCFastQC Report
Sun 19 Mar 2023
SRR4895952_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895952_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1820502
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCACA1832500.0141.612762
TCTTCAC1836850.0141.27741
TTCACAG583400.0140.298323
TCACATG181800.0139.605914
TTCACAT588200.0139.601753
TCACAGT195750.0139.196474
TCACAGG193800.0137.691714
TCACAGA147200.0136.832754
TCACATA162700.0136.632344
TCACAAT165800.0135.410314
TTCACAA481000.0135.359653
TCACATT189400.0135.208184
TTCACAC226250.0134.513233
TCACAAG156300.0134.155794
TCACACG59250.0133.163444
CACATAG56550.0130.194735
CACAGGT67150.0130.127825
CACATGG66200.0129.41135
CACATGT64900.0129.258035
TCACATC68900.0129.098464
Produced by FastQC (version 0.11.5)