SRR4895952_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895952_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1820502
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	17873	0.9817621732906638	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	13634	0.7489143104484367	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6334	0.34792601161657605	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5373	0.29513837392103937	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC	3250	0.17852218783610235	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	2634	0.14468536700316725	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG	2546	0.1398515354556051	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC	2384	0.13095289101577476	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	2105	0.11562744781384475	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	2069	0.11364997127166024	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC	1874	0.10293864000149408	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	51355	138.64203	8
AAGCAGT	51545	137.95036	1
GTGGTAT	51690	137.65993	6
GTATCAA	51785	137.53253	9
TGGTATC	51895	137.17163	7
AGCAGTG	52165	136.2003	2
CAGTGGT	52400	135.7947	4
AGTGGTA	52600	135.30574	5
GCAGTGG	52945	134.2754	3
CAACGCA	51060	28.531605	10-14
TCAACGC	51170	28.48153	10-14
GTACATG	51080	28.329206	20-24
ATCAACG	51525	28.254555	10-14
TACATGG	51265	28.221355	20-24
AGAGTAC	51540	28.1681	15-19
CGCAGAG	51735	28.095331	15-19
CAGAGTA	51745	28.05094	15-19
AGTACAT	51740	27.962269	20-24
AACGCAG	52260	27.881973	10-14
GCAGAGT	52095	27.843132	15-19