FastQCFastQC Report
Sun 19 Mar 2023
SRR4895951_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895951_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1438110
Sequences flagged as poor quality0
Sequence length150
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTCTA1440250.0142.335052
CGTCTAG444400.0142.130843
TCCGTCT1443500.0142.014591
CGTCTAA369850.0141.969713
CGTCTAT458550.0141.910573
CGTCTAC172050.0140.973633
GTCTAAG118500.0140.923874
GTCTAGT147100.0140.706634
GTCTATA126400.0140.574264
GTCTAGG144450.0140.574174
GTCTAGA113600.0140.477394
GTCTATG148600.0140.389474
GTCTAAT122750.0139.296234
GTCTACG44300.0138.68654
GTCTAAA106500.0137.461644
GTCTATT139100.0137.013984
GTCTATC53950.0136.867074
GTCTACC55500.0136.768884
TCTAGTA44450.0136.294335
GTCTAGC45550.0136.13244
Produced by FastQC (version 0.11.5)