Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895950_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 979942 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 13884 | 1.4168185464037668 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 8760 | 0.893930457108686 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTAAGCGACTAAGCGTAC | 5113 | 0.5217655738809032 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3094 | 0.3157329719514012 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 2822 | 0.2879762271644648 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC | 2565 | 0.26175018521504334 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 2435 | 0.24848409395658108 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 2228 | 0.22736039479887585 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 1933 | 0.19725657232775004 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG | 1537 | 0.15684601741735735 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 1407 | 0.14357992615889512 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAGAAATCAACCGAGA | 1320 | 0.13470184970130886 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGCAATAGATATAGTACC | 1306 | 0.1332731937196283 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTAAGCGACTAAGCGTACA | 1261 | 0.12868108520708368 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 1236 | 0.12612991381122557 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTGCCCCTCATTTACATAAAT | 1214 | 0.12388488298287041 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 1151 | 0.11745593106530794 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTCTAAGCTGCAGCAAGA | 1108 | 0.11306791626443198 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTCTAAGCTGCAGCAAGAG | 1097 | 0.11194540085025441 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 27115 | 0.0 | 140.34526 | 1 |
GGTATCA | 27440 | 0.0 | 139.19658 | 8 |
GTGGTAT | 27575 | 0.0 | 138.33234 | 6 |
GTATCAA | 27625 | 0.0 | 138.31651 | 9 |
TGGTATC | 27785 | 0.0 | 137.41638 | 7 |
CAGTGGT | 27860 | 0.0 | 136.8914 | 4 |
AGCAGTG | 27855 | 0.0 | 136.56512 | 2 |
AGTGGTA | 28045 | 0.0 | 136.03972 | 5 |
GCAGTGG | 28160 | 0.0 | 135.23946 | 3 |
CTACGCG | 30 | 4.6152607E-5 | 28.799654 | 105-109 |
CGAGGTA | 20 | 0.006286056 | 28.799652 | 125-129 |
CAACGCA | 27425 | 0.0 | 28.495115 | 10-14 |
ATCAACG | 27500 | 0.0 | 28.39646 | 10-14 |
AGAGTAC | 27425 | 0.0 | 28.379602 | 15-19 |
GTACATG | 27380 | 0.0 | 28.352617 | 20-24 |
TACATGG | 27370 | 0.0 | 28.320887 | 20-24 |
CGCAGAG | 27510 | 0.0 | 28.312855 | 15-19 |
TCAACGC | 27620 | 0.0 | 28.30958 | 10-14 |
CAGAGTA | 27515 | 0.0 | 28.276308 | 15-19 |
AGTACAT | 27480 | 0.0 | 28.21276 | 20-24 |