FastQCFastQC Report
Sun 19 Mar 2023
SRR4895938_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895938_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1526471
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCATTC1532200.0142.037891
CATTCCG470150.0141.57223
TCATTCC1539150.0141.396512
ATTCCGA116550.0140.004044
CATTCCT476250.0139.60923
ATTCCGG145450.0139.436224
ATTCCGT161050.0138.899064
CATTCCA357650.0138.167983
ATTCCTG150150.0137.825244
CATTCCC259400.0135.56523
ATTCCTA128600.0135.477544
ATTCCAG115150.0134.958314
ATTCCGC56600.0134.134434
ATTCCAT121700.0133.259414
ATTCCCG63100.0133.19614
TTCCGAT41850.0131.16035
TTCCGTA43600.0130.637365
TCCGATA12300.0128.083826
ATTCCTT163550.0127.31754
TCCGGAT11200.0127.297266
Produced by FastQC (version 0.11.5)