FastQCFastQC Report
Sun 19 Mar 2023
SRR4895936_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895936_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences779028
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGCTAA780500.0142.26041
GGCTAAC780950.0142.178452
GCTAACG241550.0141.944243
GCTAACT230400.0141.73013
GCTAACC131950.0141.23813
GCTAACA180300.0141.190413
CTAACGT76600.0140.95274
CTAACTG76150.0140.849764
TAACGTA20950.0140.833455
CTAACGG82050.0140.710334
CTAACGA58250.0139.965064
CTAACTA57550.0139.19084
CTAACAT60550.0138.650254
CTAACCG32800.0138.623344
TAACGTG23600.0137.702655
TAACGGA19100.0136.564325
CTAACTT71550.0136.458454
CTAACGC27900.0135.892944
TAACGAG19850.0135.71285
TAACTGA18650.0135.6565
Produced by FastQC (version 0.11.5)