FastQCFastQC Report
Sun 19 Mar 2023
SRR4895928_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895928_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559395
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGACAC561350.0142.024752
AAGGACA563250.0141.545671
GGACACT164500.0141.102923
GGACACG165450.0141.068053
GACACAT50500.0140.6984
GACACGT54550.0140.442294
GGACACA145450.0139.641753
GACACTG51000.0139.31864
GACACTA46500.0139.007584
GACACTT52250.0138.849934
GACACGG54600.0138.616854
GGACACC92950.0138.392323
GACACGA41100.0138.197654
GACACTC17400.0137.20814
GACACGC17900.0135.764284
ACACGGT18550.0135.233065
GACACAG44050.0134.281544
GACACCT21850.0134.052384
GACACCG22400.0133.942464
GACACAA40100.0132.935644
Produced by FastQC (version 0.11.5)