FastQCFastQC Report
Sun 19 Mar 2023
SRR4895911_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895911_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences962220
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGAGAAC967350.0141.79041
GAGAACA968100.0141.680562
AGAACAT292750.0140.212043
AGAACAG321350.0140.065193
GAACATG101050.0139.445824
GAACAGT100700.0139.151924
GAACATA76850.0135.778924
GAACAAT81600.0135.474264
AGAACAA243700.0134.857383
AGAACAC135300.0134.805513
GAACATT84950.0133.739614
GAACAGA79600.0133.326584
GAACAGG117500.0132.479874
GAACACT30950.0132.416584
AACAGTG35150.0132.005135
GAACACG38400.0131.598254
GAACATC39400.0130.971714
GAACAAG88450.0127.8834154
AACATCG11850.0126.9109955
AACATGG38050.0126.627255
Produced by FastQC (version 0.11.5)