FastQCFastQC Report
Sun 19 Mar 2023
SRR4895906_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895906_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2011193
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCATTC2020950.0141.876571
CATTCCG601800.0141.726913
CATTCCT645300.0140.369633
ATTCCGA153200.0140.008764
ATTCCGG190000.0139.528964
ATTCCGT210900.0139.187914
ATTCCAG152750.0138.46124
ATTCCTG200200.0138.437584
ATTCCTA185600.0137.498154
ATTCCAT180800.0136.023034
ATTCCGC59450.0134.174514
ATTCCCG75200.0133.183464
TTCCGTA63550.0133.033485
TCCGATA17800.0132.155646
TTCCGAT59550.0131.07635
CATTCCC313450.0130.446563
TCCGTAG19200.0130.3166
TTCCGAG49300.0129.988395
TTCCGGA49250.0128.528235
TTCCTAG62300.0128.379785