FastQCFastQC Report
Sun 19 Mar 2023
SRR4895904_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895904_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences347074
Sequences flagged as poor quality0
Sequence length150
%GC29

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGGAT100.0074637122142.522348
CAAGTAC151.3166791E-4142.522348
CTAGTAA100.0074637122142.522348
ACTATGC400.0142.50187
ACTGCGA400.0142.50187
ACTGCAT307.3305273E-10142.50187
ACGCATC151.3174351E-4142.50187
ACTGAAT700.0142.50187
TAACGCG2250.0142.50185
ACTTAGC100.0074669286142.50187
ACTAGGC151.3174351E-4142.50187
CTAACGA27100.0142.50184
ACCTAGT151.3174351E-4142.50187
ACATGAT600.0142.50187
GCTAACT117850.0142.441363
AGGCTAA347550.0142.296781
GCTAACG102100.0142.222663
GGCTAAC347900.0142.153642
CTAACTA32300.0141.619434
GCTAACA80400.0141.61563