FastQCFastQC Report
Sun 19 Mar 2023
SRR4895902_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895902_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1923773
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACCTC1930550.0142.035432
AGCACCT1930850.0142.013371
CACCTCG608650.0141.460243
ACCTCGT197950.0140.52134
ACCTCGA151950.0140.379964
CACCTCT592350.0140.119163
ACCTCGG204800.0139.962364
CACCTCA488800.0139.19863
ACCTCAT163750.0138.576924
ACCTCTA165200.0138.395984
ACCTCTG189900.0137.546054
ACCTCAG154800.0137.335054
CCTCGTA57100.0136.171985
CCTCGGA54750.0134.857395
ACCTCGC61550.0134.663774
CCTCGAT54200.0134.253485
ACCTCTT203850.0133.552434
CCTCTAG55600.0133.308445
CCTCGAG49850.0133.101725
CACCTCC278550.0133.070823
Produced by FastQC (version 0.11.5)