Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895899_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1104574 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 17165 | 1.553992761010127 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 12961 | 1.1733935435742648 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3789 | 0.343028171946832 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 2247 | 0.2034268414791585 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCAGTTACTGAGAACTCATA | 2007 | 0.1816990079433338 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 1956 | 0.17708184331697108 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC | 1731 | 0.15671199937713542 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGCAATAGATATAGTACC | 1471 | 0.1331735130466587 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGTTACTGAGAACTCATAAG | 1370 | 0.12402971643366582 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCAGTTGACACAAAATAGACT | 1223 | 0.11072141839297321 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 1137 | 0.10293561137596939 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 21935 | 0.0 | 139.5229 | 1 |
GGTATCA | 22005 | 0.0 | 139.15204 | 8 |
GTGGTAT | 22100 | 0.0 | 138.52129 | 6 |
GTATCAA | 22170 | 0.0 | 138.21384 | 9 |
TGGTATC | 22355 | 0.0 | 137.00562 | 7 |
CAGTGGT | 22480 | 0.0 | 136.21178 | 4 |
AGCAGTG | 22465 | 0.0 | 136.07097 | 2 |
GCAGTGG | 22635 | 0.0 | 135.30351 | 3 |
AGTGGTA | 23835 | 0.0 | 128.46825 | 5 |
TCGTACG | 85 | 0.0 | 28.799139 | 50-54 |
CAACGCA | 21955 | 0.0 | 28.536533 | 10-14 |
ATCAACG | 21935 | 0.0 | 28.52973 | 10-14 |
TCAACGC | 22110 | 0.0 | 28.329967 | 10-14 |
TACATGG | 21995 | 0.0 | 28.282457 | 20-24 |
AGAGTAC | 22105 | 0.0 | 28.19958 | 15-19 |
GTACATG | 22045 | 0.0 | 28.198713 | 20-24 |
AGTACAT | 22085 | 0.0 | 28.160683 | 20-24 |
CAGAGTA | 22205 | 0.0 | 28.072584 | 15-19 |
CGCAGAG | 22250 | 0.0 | 28.041693 | 15-19 |
GCAGAGT | 22275 | 0.0 | 27.945578 | 15-19 |