Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895898_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2157379 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 62922 | 2.916594627091485 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 32378 | 1.5008025942590522 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 7263 | 0.3366585101644171 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 6933 | 0.32136217141262613 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 6096 | 0.28256509403308366 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGCAATAGATATAGTACC | 5190 | 0.24056969127816671 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGCTTCCGGATAGCTGAAC | 3472 | 0.16093602468550958 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA | 3325 | 0.1541222010597118 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCAGTTACTGAGAACTCATA | 3125 | 0.14485169272529305 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCAGTTGACACAAAATAGACT | 2552 | 0.11829168634718332 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 2316 | 0.10735248651256919 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGACAAACCTACCGAGCC | 2300 | 0.10661084584581569 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGTTTCAAAGTGGAGAACC | 2300 | 0.10661084584581569 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 57455 | 0.0 | 140.10574 | 1 |
GGTATCA | 57790 | 0.0 | 139.40202 | 8 |
TGGTATC | 57995 | 0.0 | 138.87201 | 7 |
GTGGTAT | 58035 | 0.0 | 138.70186 | 6 |
GTATCAA | 58160 | 0.0 | 138.52756 | 9 |
CAGTGGT | 59055 | 0.0 | 136.35497 | 4 |
AGCAGTG | 59390 | 0.0 | 135.4803 | 2 |
GCAGTGG | 59825 | 0.0 | 134.41095 | 3 |
AGTGGTA | 61405 | 0.0 | 131.17177 | 5 |
ATCAACG | 57630 | 0.0 | 28.547762 | 10-14 |
CAACGCA | 57715 | 0.0 | 28.54564 | 10-14 |
AGAGTAC | 57715 | 0.0 | 28.468689 | 15-19 |
TCAACGC | 57875 | 0.0 | 28.459259 | 10-14 |
TACATGG | 57675 | 0.0 | 28.385406 | 20-24 |
GTACATG | 57935 | 0.0 | 28.262989 | 20-24 |
CAGAGTA | 58185 | 0.0 | 28.248629 | 15-19 |
CGCAGAG | 58175 | 0.0 | 28.20893 | 15-19 |
AGTACAT | 58185 | 0.0 | 28.13908 | 20-24 |
ACATGGG | 57970 | 0.0 | 28.124208 | 20-24 |
GCAGAGT | 58435 | 0.0 | 28.073557 | 15-19 |