FastQCFastQC Report
Sun 19 Mar 2023
SRR4895885_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895885_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1104564
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGATG1108400.0142.047321
AGGATGA1112900.0141.472962
GGATGAC122700.0140.68373
GGATGAT390850.0140.080723
GATGACC36700.0140.017854
GGATGAA299450.0139.329353
GGATGAG314350.0139.050863
GATGATA113550.0135.70094
GATGACG32500.0134.209184
GATGAGA84750.0134.132864
GATGATG120350.0134.073974
GATGAGC35550.0133.721254
GATGATC43350.0133.664354
GATGAAC21250.0133.48684
GATGAAG93300.0132.993794
GATGACA26350.0132.805194
GATGAAT111050.0132.658814
GATGAGT107300.0132.579074
GATGACT32150.0132.566684
ATGACCG8800.0130.393945
Produced by FastQC (version 0.11.5)