FastQCFastQC Report
Sun 19 Mar 2023
SRR4895884_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895884_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1076620
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTTCTA1082300.0141.793412
GTTCTAG326400.0141.73623
GTTCTAA271650.0141.02243
GTTCTAT365800.0140.907473
GTGTTCT1089300.0140.88221
GTTCTAC123650.0140.296163
TTCTATG118300.0137.844864
TTCTAGG106350.0137.517884
TTCTAGT116750.0137.110964
TCTATGA28200.0136.731165
TTCTAGA83300.0136.383744
TCTAATG32350.0135.934655
TCTAGGT37300.0134.901025
TCTATAG34250.0134.844675
TCTAGAT29400.0134.786625
TTCTATA101650.0134.340654
TCTAGTA32000.0134.30335
TTCTACG33750.0133.885884
TCTATGG40900.0133.831165
TTCTAGC31950.0133.621174
Produced by FastQC (version 0.11.5)