FastQCFastQC Report
Sun 19 Mar 2023
SRR4895875_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895875_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41026
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAG151.3076368E-4142.540259
ATAGCTA151.3076368E-4142.540256
ATATGCG151.3076368E-4142.540256
TATGCCT151.3076368E-4142.540257
CATAGTG1050.0142.540255
CATAGTA1400.0142.540255
CATACGT351.2732926E-11142.540255
CATACCG600.0142.540255
CATACAT307.1486284E-10142.540255
CATACAC307.1486284E-10142.540255
CATAAGG650.0142.540255
ATAGTTA351.2732926E-11142.540256
ACATACA1200.0142.540254
ATACCGG151.3076368E-4142.540256
ATACAGC151.3076368E-4142.540256
TACCGCT151.3076368E-4142.540257
TAATCAG100.0074371016142.540247
CATATGC450.0142.540245
CATATCT202.2932654E-6142.540245
TACTTCG100.0074371016142.540247