SRR4895864_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895864_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2978530
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

$Per Sequence quality graph$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	20765	0.6971559796275344	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	14365	0.4822848854972084	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5328	0.1788801858634964	No Hit
GTGAACCCCGTGGTCTCCTACGCCGTGGCTCTCAGCTGTCAATGTGCACT	3556	0.1193877516761624	No Hit
GGGGGTCCCAAGGACCACCCCTTGACCTGTGATGACCCCCGCTTCCAGGA	3527	0.11841411703088435	No Hit
AGCACCACTGACTGCGGGGGTCCCAAGGACCACCCCTTGACCTGTGATGA	3408	0.11441885762439861	No Hit
GGCGTGAACCCCGTGGTCTCCTACGCCGTGGCTCTCAGCTGTCAATGTGC	3359	0.11277375080996331	No Hit
CGCAGCACCACTGACTGCGGGGGTCCCAAGGACCACCCCTTGACCTGTGA	3167	0.10632761798605353	No Hit
TGTCTTGATGACTGCTGATTTTCTGGAATGGAAAATTAAGTTGTTTAGTG	3143	0.1055218513830648	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGTGGTGTGCAACTACCGC	3066	0.10293668353180932	No Hit
CGCCGCAGCACCACTGACTGCGGGGGTCCCAAGGACCACCCCTTGACCTG	3060	0.10273524188106214	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	30600	140.70485	8
TGGTATC	30740	140.1343	7
GTGGTAT	30780	139.90541	6
GTATCAA	30865	139.47345	9
AAGCAGT	31290	137.56305	1
CAGTGGT	31470	136.90433	4
AGCAGTG	32130	133.98004	2
GCAGTGG	32310	133.2782	3
AGTGGTA	35005	123.10151	5
TCAACGC	30415	28.548862	10-14
ATCAACG	30415	28.501516	10-14
CAACGCA	30500	28.483463	10-14
AGAGTAC	30720	28.24198	15-19
TACATGG	30770	28.182049	20-24
CGCAGAG	30860	28.09986	15-19
GTACATG	30870	28.058104	20-24
CAGAGTA	30990	28.03774	15-19
GAGTACA	30730	27.97975	20-24
AGTACAT	31080	27.840723	20-24
GCAGAGT	31525	27.543652	15-19