Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895838_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 413724 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 4890 | 1.1819473852133306 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 3988 | 0.963927642582978 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3819 | 0.9230791542187545 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 1491 | 0.3603851843257824 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 1087 | 0.26273554350243156 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 1042 | 0.251858727074088 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 919 | 0.22212876216994906 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 651 | 0.1573512776633698 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATAGGTTTGGTCCTAGCCTT | 639 | 0.15445079328247818 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGTTTCAAAGTGGAGAACC | 584 | 0.14115690653672497 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTTACCTCGTTGCACTG | 545 | 0.13173033229882725 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 490 | 0.11843644555307403 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTCCGGCGGTGACGAC | 482 | 0.1165027892991463 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 11750 | 0.0 | 113.58333 | 1 |
GTGGTAT | 11860 | 0.0 | 112.169815 | 6 |
GGTATCA | 12000 | 0.0 | 111.284065 | 8 |
TGGTATC | 11995 | 0.0 | 110.96782 | 7 |
GTATCAA | 12055 | 0.0 | 110.89663 | 9 |
CAGTGGT | 12010 | 0.0 | 110.80903 | 4 |
AGCAGTG | 12085 | 0.0 | 110.36139 | 2 |
GCAGTGG | 12150 | 0.0 | 109.47254 | 3 |
AGTGGTA | 12180 | 0.0 | 109.381516 | 5 |
CCGACAA | 135 | 0.0 | 75.21923 | 1 |
CGGTCTG | 95 | 4.5474735E-10 | 61.050747 | 145 |
CGACAAC | 195 | 0.0 | 52.068558 | 2 |
AAATATA | 1195 | 0.0 | 47.92739 | 145 |
GACAACG | 80 | 3.7235284E-5 | 45.327538 | 3 |
CCGCAAG | 515 | 0.0 | 39.41626 | 145 |
CACGCAG | 270 | 0.0 | 37.59143 | 145 |
TGCGGCT | 180 | 1.2896271E-7 | 32.22123 | 145 |
CCGGACG | 165 | 2.3825396E-6 | 30.756626 | 145 |
TGTAAAC | 215 | 6.1116407E-7 | 26.975914 | 145 |
TAACCCG | 55 | 6.7757355E-9 | 26.362823 | 115-119 |