FastQCFastQC Report
Sun 19 Mar 2023
SRR4895832_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895832_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences794728
Sequences flagged as poor quality0
Sequence length151
%GC33

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC795050.0144.16932
ATAGCGA795300.0144.123981
AGCGACT279350.0144.07793
AGCGACG254600.0143.637973
AGCGACA240500.0143.57313
GCGACTA82650.0143.534764
GCGACGT90600.0143.51644
GCGACTT102900.0143.461874
GCGACAT89050.0143.341964
GCGACTG92950.0143.224184
GCGACGA74450.0142.586074
CGACTAG27400.0142.390415
CGACTGA27200.0142.376865
GCGACAG81050.0142.364274
CGACGAT26350.0142.04335
CGACTAT28250.0141.935295
CGACGTT30950.0141.90275
CGACTTG35700.0141.808725
CGACGTA26300.0141.764925
CGACAGT28850.0141.73315
Produced by FastQC (version 0.11.5)