SRR4895818_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895818_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	467313
Sequences flagged as poor quality	0
Sequence length	151
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	28787	6.1601111032648355	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	7535	1.6124096697502528	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4533	0.9700136739187654	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	2686	0.5747753646913311	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	1190	0.2546473134708429	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	1137	0.24330587850113308	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	609	0.13031950748213725	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGAAGCCAAGATCGGAAGAGCACA	490	0.10485477613505294	No Hit

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	22045	0.0	68.52316	1
AGCAGTG	22655	0.0	66.61411	2
GTGGTAT	24105	0.0	62.556866	6
TGGTATC	24125	0.0	62.511696	7
GGTATCA	24215	0.0	62.39912	8
GTATCAA	24250	0.0	62.279163	9
GTACGAG	35	0.0035614066	62.160065	1
CAGTGGT	24275	0.0	62.05574	4
AGTGGTA	24415	0.0	61.716393	5
GCAGTGG	24700	0.0	61.10544	3
ATTCGGG	50	2.0095706E-4	57.997433	145
GCGTTCG	40	0.0060499352	54.372597	145
TGCGGCT	165	1.3624231E-9	39.543705	145
CGGGCTT	80	0.002035949	36.248398	145
AAATATA	1245	0.0	36.102818	145
CGTGGGG	110	2.4348058E-4	32.953087	145
CGTGCGC	165	2.38366E-6	30.756214	145
GTTAGCG	35	3.7781301E-6	28.999336	85-89
GTTTCGC	20	0.006080588	28.995615	95-99
CGTGGGC	155	5.4959E-5	28.063274	145